CDS

Accession Number TCMCG066C13697
gbkey CDS
Protein Id XP_034585684.1
Location join(47251938..47254355,47254438..47254515,47254643..47254795,47255002..47255165,47255239..47255386,47255505..47255627,47255740..47255827,47255993..47256180)
Gene LOC117848397
GeneID 117848397
Organism Setaria viridis

Protein

Length 1119aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034729793.1
Definition uncharacterized protein LOC117848397 isoform X1 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category T
Description PB1 domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01001        [VIEW IN KEGG]
KEGG_ko ko:K04422        [VIEW IN KEGG]
EC 2.7.11.25        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04010        [VIEW IN KEGG]
map04010        [VIEW IN KEGG]
GOs GO:0001666        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0004674        [VIEW IN EMBL-EBI]
GO:0004712        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009685        [VIEW IN EMBL-EBI]
GO:0009686        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009723        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009743        [VIEW IN EMBL-EBI]
GO:0009744        [VIEW IN EMBL-EBI]
GO:0009746        [VIEW IN EMBL-EBI]
GO:0009750        [VIEW IN EMBL-EBI]
GO:0009756        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010039        [VIEW IN EMBL-EBI]
GO:0010104        [VIEW IN EMBL-EBI]
GO:0010105        [VIEW IN EMBL-EBI]
GO:0010182        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016101        [VIEW IN EMBL-EBI]
GO:0016102        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0034284        [VIEW IN EMBL-EBI]
GO:0034285        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0036293        [VIEW IN EMBL-EBI]
GO:0040034        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042445        [VIEW IN EMBL-EBI]
GO:0042446        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046777        [VIEW IN EMBL-EBI]
GO:0048506        [VIEW IN EMBL-EBI]
GO:0048509        [VIEW IN EMBL-EBI]
GO:0048510        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070297        [VIEW IN EMBL-EBI]
GO:0070298        [VIEW IN EMBL-EBI]
GO:0070482        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071241        [VIEW IN EMBL-EBI]
GO:0071248        [VIEW IN EMBL-EBI]
GO:0071281        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071322        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902532        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000035        [VIEW IN EMBL-EBI]
GO:2000069        [VIEW IN EMBL-EBI]
GO:2000280        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATAACCAAGTTGGTTCCAACCACCAGAAAAACTTGAATGTGGTCTATCAGGATCTGACCAAAGATCAAGGTCTTAGTAGGTTTGACTCTGAGAACCTGTTGGATGTCTCAACTACTGTTTTTCCACTGAAAGGCATTATGGATCCTACAAAATTGGTTCATCTGAAGACCATACCATCTGAAAATGGACTCAAAACAGTTGAAAATTCAAGCGATAGTCTGCTTGATATGGTTTCTGAAAGCCCACTTGCCGGAAAAGTCAAGTTCATGTGCAGCTTTGGTGGGAAAATCTTGCCAAGGCCAAGCGATGGAAAGCTCAGGTATGTGGGTGGGGAGACACGCCTCATCTCCATTAACAGGAACTTCTCGTGGAAAGAACTCATGCAGAAAACTCTCACAATCTGTAGTCAGCCTCATATCATCAAATATCAGCTGCCTGATGAGGATCTTGATGCATTGATATCTCTTTCATGTGATGAGGATTTTCAGAATATGATGGAAGAATACGACAATCTTGAGAAGGCCAATGGCTCAGTTAGACTAAGGATATTTCTTGTTTCTCTGACTGAATGTGAGGATCCATCATTGGATTCAAAGAGCTTGGAGAGTGAGCCGGAGTACCATTTTGTTGTTGCTGTCAACAATCTTGCACGACTGGATCGGAGCATCAGCGGCAACAATTTAACGAGCCATTCGAACCATCAATTGGATAATTCTCCAGTTCCTTATGGAGACTCACCTCTGTGTCAAACCAATACACAAACTGGAGCCAAAGATTCTCTTGGAGCAGCTCTTAACGAGTCTTCCTCTCAGTTTTTTCTTGCTCCATACACACAACAAATGGTTGTGGAGTCATCAACTACTCCATCCCCCTGCTCAGGTCAGCAGAGGACGAAGCAACAGTCTAGGATGCAACCCCCTGCAGATGAATCCACCACGAATGTGAATAGAAGTGAGGTTTGCAATAGCTCAAATTTGAAAGCCATGCCTCCAGGCCATATAAACAAGAAGCAAAATGATGCAGACAAAAGCATTGGAATTGGATCTCCCATGCAACATCCTCATATTCAAAGGCAGGTAAAAGGTTTGGCTGGAAATGATAGTGACTTGATTCCATGTACCAACTATGGTATTTCTACTCCAGTGGAAGCATCCCTGTATTCTGAAAAGGCCTCTGTGCATCCAGAGAATGCAGGATGGGCACCTGGGCAGCAGGAACACACTGCTCAAATTCTAGGCATGACTCATGCCTTCTCTGATCCTTTGCTAAAGAATCTCAATGATGTACCTGCATCCAATATGTCATTACCTGCTGGTTCCTACATAACCCAATCATTTTCCCACAAAATATGCCAAAGTAATGAGTTGGAGAGAACAAGTAAGACTAGGCCTGCATTTGAATGTGTTAAGCCCCCTGACATTGCTCGTACAGACGAACCAAATTTCCTTGTTTCTAATCATATTCACCAACGGTACGATCAAGGAGTTATTGGCCCAGACAGTTCACAGCCACCAGTATCTTCTCAACATGAAATTTTGTCCAGTAATGTGACACAAAAAGGTCATGATGGTGGTCCTGTAGTTCAACAGCAGGATAAAAGTGCAGGTCCAAGCGATGCTCCCTGGAGCAATTTTGTTGATGCTGGGTTAATTTACCCCACACATGGTGCAAGGTTGTCCTCATATGAGTTAGATGCTCTAGAAAGTTCAGTTCCAAAGCCGATGCGTGCTACTGATCATTCCCTTTCATATCTTCTTAATGTTTCCCAAGGAGGGGGGAATTCAAATCATGGGTCACACATAGAGAAACCTAATTCAGGGCTTATAGATTATGGAACTACTGGCTATGTGCATGGAAATGATAAAGTTGCTCCAGAGCCCCATAAAGTGTTTCCTATAAACACTTCTGAAGCTTTTGTATTGCAAAGAACAATGGTCAATGTAGAATCCAGTGTGCATCAGAACGGTAATGTGTGCCAGTCATCAGTGCATAACTCTGGTTTGGCTACCACTCCACATGTTGGGCTGATTGATACTGATCTGAGCATGAACTTGCATGGCAATGGTGGCCTCCCATTGTCTTCATCTCAAAATCCAATTATTGATGGTGTTCCTAGGAGAGAGGATCCGCATCATGATTGGGGCAATATCACCTGCCCTGAAGTAGTAATTGGATTTGACCATACCATCATCACTAATGAAAGCATGAAGCTACCACACAGGATGCACGATAATGGTCATATGAATGTGCCTGTTATAGTTGAGGATGTGACTGATAACATGCCATCAGGCATTCCATCATCCAGCTCGGTTATTCCTCAGGTTGTAATAGCTGCTGAAGAACGACAAGAGGTGATTATGTCATCACAAAAGGACGATGATACTAGGAGCAACGGTGCAGAGTTTGCTAATGAGGATCATGATGGAGCTGTAGATGGGTCCATTAGTGATGCTGCTGTTGCTGAACTTGAAGCCAGCATGTATGGATTGCAGATCATTAAAAATGGTGACCTCGAGGAGCTCCGTGAATTGGGATCTGGGACATTTGGAACTGTATACTATGGAAAGTGGCGAGGAACTGATGTTGCTATCAAACGTATTAAGAAAAGCTGTTTTGCTGGGCGATCATCTGAACAAGAGAAACTTACCAATGACTTTTGGAGGGAAGCACAGATTCTCTCAAAGTTACATCATCCAAATGTTGTTGCTTTCTATGGTGTGGTCCCTGATGGAACTGGAGGAACATTAGCAACTGTGACAGAATTCATGGTGAATGGATCACTAAGAAATGTTCTTTTAAGGAAAGACAGAATGCTTGACCGTCGGAGAAAACTTACCATTGCTATGGATGCGGCATTTGGGATGGAATACTTGCACTCCAAAAGCATAGTGCATTTTGATTTGAAATGCGATAACTTACTTGTTAACCTGAGAGATCCTCAGAGGCCAATCTGCAAGGTTGGAGACTTCGGCTTGTCAAGAATTAAGCGCAACACTTTAGTTTCTGGTGGTGTACGTGGCACTCTTCCATGGATGGCACCGGAGCTATTAAATGGCAGCAGCAGCAGAGTGTCGGAGAAGGTGGATGTTTTCTCATTTGGTATTGTTTTATGGGAAATTTTGACTGGTGAGGAACCATACGCTAATATGCATTGTGGTGCTATCATAGGCGGTATTGTCAATAACACTCTCCGGCCTCCAATACCTGAAAACTGTGACCCCGATTGGCGAAAGCTGATGGAACAATGTTGGTCGGCCAATCCTGATGTCCGGCCCTCATTCACCGAGGTCACCGACAGGTTACGAGCCATGCCACCAGTGCTTCAGTCGAGAGGACAGGCTCCGGGGAACAGATAA
Protein:  
MNNQVGSNHQKNLNVVYQDLTKDQGLSRFDSENLLDVSTTVFPLKGIMDPTKLVHLKTIPSENGLKTVENSSDSLLDMVSESPLAGKVKFMCSFGGKILPRPSDGKLRYVGGETRLISINRNFSWKELMQKTLTICSQPHIIKYQLPDEDLDALISLSCDEDFQNMMEEYDNLEKANGSVRLRIFLVSLTECEDPSLDSKSLESEPEYHFVVAVNNLARLDRSISGNNLTSHSNHQLDNSPVPYGDSPLCQTNTQTGAKDSLGAALNESSSQFFLAPYTQQMVVESSTTPSPCSGQQRTKQQSRMQPPADESTTNVNRSEVCNSSNLKAMPPGHINKKQNDADKSIGIGSPMQHPHIQRQVKGLAGNDSDLIPCTNYGISTPVEASLYSEKASVHPENAGWAPGQQEHTAQILGMTHAFSDPLLKNLNDVPASNMSLPAGSYITQSFSHKICQSNELERTSKTRPAFECVKPPDIARTDEPNFLVSNHIHQRYDQGVIGPDSSQPPVSSQHEILSSNVTQKGHDGGPVVQQQDKSAGPSDAPWSNFVDAGLIYPTHGARLSSYELDALESSVPKPMRATDHSLSYLLNVSQGGGNSNHGSHIEKPNSGLIDYGTTGYVHGNDKVAPEPHKVFPINTSEAFVLQRTMVNVESSVHQNGNVCQSSVHNSGLATTPHVGLIDTDLSMNLHGNGGLPLSSSQNPIIDGVPRREDPHHDWGNITCPEVVIGFDHTIITNESMKLPHRMHDNGHMNVPVIVEDVTDNMPSGIPSSSSVIPQVVIAAEERQEVIMSSQKDDDTRSNGAEFANEDHDGAVDGSISDAAVAELEASMYGLQIIKNGDLEELRELGSGTFGTVYYGKWRGTDVAIKRIKKSCFAGRSSEQEKLTNDFWREAQILSKLHHPNVVAFYGVVPDGTGGTLATVTEFMVNGSLRNVLLRKDRMLDRRRKLTIAMDAAFGMEYLHSKSIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSSRVSEKVDVFSFGIVLWEILTGEEPYANMHCGAIIGGIVNNTLRPPIPENCDPDWRKLMEQCWSANPDVRPSFTEVTDRLRAMPPVLQSRGQAPGNR